PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000128326
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 327aa    MW: 35459.1 Da    PI: 7.1381
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000128326genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2507.5e-164392255
            AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                   ++ GVr+++ +grWvAeI+       ++ r +lg+f taeeAa+ +++a+  l+g
  MDP0000128326 43 KFVGVRQRP-SGRWVAEIKG----TtQKIRMWLGTFETAEEAARSYDEAACLLRG 92
                   799******.7******766....1346**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.5E-124392IPR001471AP2/ERF domain
SMARTSM003809.1E-3443106IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-1843100IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.4E-2643100IPR001471AP2/ERF domain
CDDcd000181.98E-304399No hitNo description
PROSITE profilePS5103219.08543100IPR001471AP2/ERF domain
PRINTSPR003674.0E-74455IPR001471AP2/ERF domain
PRINTSPR003674.0E-76682IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MEFQFQRPQQ VSFAAAGIPK SSSKVGKLKG RNNNSRSNNN ANKFVGVRQR PSGRWVAEIK  60
GTTQKIRMWL GTFETAEEAA RSYDEAACLL RGSNARTNFI THVSLDSPLA SRIRNLLNTK  120
KGGGGGGGGA TKQLALLQHQ SSSTSTTTST SSDHDHLPPP SKQLVRKSST STTCTSTSSG  180
SDTTSLSSEV FHDNSLLFDD VYKPDLRNCN EDFELSSSSN TSQSNLPSWG SYQTGVDCFS  240
FAQQAFEFPK HQAAAALSSA ESNTTTTSTI CTAGEADSGL MDFERLKVER QISASLYAMN  300
GMQEYMETVH DPNEALWDLP PLCSLFC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008391774.10.0PREDICTED: ethylene-responsive transcription factor RAP2-11-like
TrEMBLM5VRY31e-124M5VRY3_PRUPE; Uncharacterized protein
STRINGVIT_08s0007g07250.t016e-97(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33413069
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-37related to AP2 11